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Abstract Haematophagous ectoparasites can directly affect the health of young animals by depleting blood volume and reducing energetic resources available for growth and development. Less is known about the effects of ectoparasitism on stress physiology (i.e. glucocorticoid hormones) or animal behaviour. Mexican chicken bugs (Haematosiphon inodorus; Hemiptera: Cimicidae) are blood-sucking ectoparasites that live in nesting material or nest substrate and feed on nestling birds. Over the past 50 years, the range of H. inodorus has expanded, suggesting that new hosts or populations may be vulnerable. We studied the physiological and behavioural effects of H. inodorus on golden eagle (Aquila chrysaetos) nestlings in southwestern Idaho. We estimated the level of H. inodorus infestation at each nest and measured nestling mass, haematocrit, corticosterone concentrations, telomere lengths and recorded early fledging and mortality events. At nests with the highest levels of infestation, nestlings had significantly lower mass and haematocrit. In addition, highly parasitized nestlings had corticosterone concentrations twice as high on average (42.9 ng/ml) than non-parasitized nestlings (20.2 ng/ml). Telomeres of highly parasitized female nestlings significantly shortened as eagles aged, but we found no effect of parasitism on the telomeres of male nestlings. Finally, in nests with higher infestation levels, eagle nestlings were 20 times more likely to die, often because they left the nest before they could fly. These results suggest that H. inodorus may limit local golden eagle populations by decreasing productivity. For eagles that survived infestation, chronically elevated glucocorticoids and shortened telomeres may adversely affect cognitive function or survival in this otherwise long-lived species. Emerging threats from ectoparasites should be an important management consideration for protected species, like golden eagles. 

Biodiversity science encompasses multiple disciplines and biological scales from molecules to landscapes. Nevertheless, biodiversity data are often analyzed separately with discipline‐specific methodologies, constraining resulting inferences to a single scale. To overcome this, we present a topic modeling framework to analyze community composition in cross‐disciplinary datasets, including those generated from metagenomics, metabolomics, field ecology and remote sensing. Using topic models, we demonstrate how community detection in different datasets can inform the conservation of interacting plants and herbivores. We show how topic models can identify members of molecular, organismal and landscape‐level communities that relate to wildlife health, from gut microbes to forage quality. We conclude with a future vision for how topic modeling can be used to design cross‐scale studies that promote a holistic approach to detect, monitor and manage biodiversity. 

Abstract Telomere length dynamics are an established biomarker of health and ageing in animals. The study of telomeres in numerous species has been facilitated by methods to measure telomere length by real‐time quantitative PCR (qPCR). In this method, telomere length is determined by quantifying the amount of telomeric DNA repeats in a sample and normalizing this to the total amount of genomic DNA. This normalization requires the development of genomic reference primers suitable for qPCR, which remains challenging in nonmodel organism with genomes that have not been sequenced. Here we report reference primers that can be used in qPCR to measure telomere lengths in any vertebrate species. We designed primer pairs to amplify genetic elements that are highly conserved between evolutionarily distant taxa and tested them in species that span the vertebrate tree of life. We report five primer pairs that meet the specificity and reproducibility standards of qPCR. In addition, we demonstrate an approach to choose the best primers for a given species by testing the primers on multiple individuals within a species and then applying an established computational tool. These reference primers can facilitate qPCR‐based telomere length measurements in any vertebrate species of ecological or economic interest.